mrgsolve.h File Reference

#include "RcppInclude.h"
#include <R_ext/Rdynload.h>

Go to the source code of this file.

Functions
DL_FUNC	tofun (SEXP a)
void	negative_istate (int istate, int maxsteps, double rtol, double atol, int itol)
arma::mat	MVGAUSS (Rcpp::NumericMatrix &OMEGA_, int n)
arma::mat	MVGAUSS (arma::mat &OMEGA_, int n)
arma::mat	MAKEMATRIX (const Rcpp::S4 &matlist)
template<class T>
void	sort_unique (T &a)
int	find_position (const std::string what, Rcpp::CharacterVector &table)
double	digits (const double &a, const double &b)
void	dcorr (const Rcpp::NumericMatrix &x)
Rcpp::NumericMatrix	SUPERMATRIX (const Rcpp::List &a)
void	from_to (const Rcpp::CharacterVector &a, const Rcpp::CharacterVector &b, std::vector< int > &ai, std::vector< int > &bi)
Rcpp::List	get_tokens (const Rcpp::CharacterVector &code)
void	set_omega (SEXP loc, Rcpp::NumericMatrix &omega_)
Rcpp::NumericMatrix	EXPAND_EVENTS (const Rcpp::IntegerVector &idcol_, const Rcpp::NumericMatrix &events, const Rcpp::NumericVector &id)
Rcpp::List	mat2df (Rcpp::NumericMatrix const &x)

Function Documentation

dcorr()

void dcorr

(

const Rcpp::NumericMatrix &

x

)

digits()

double digits	(	const double &	a,
		const double &	b )

Limit a number to a specific number of significant digits.

Parameters

a	the number to limit
b	the number of digits

EXPAND_EVENTS()

Rcpp::NumericMatrix EXPAND_EVENTS	(	const Rcpp::IntegerVector &	idcol_,
		const Rcpp::NumericMatrix &	events,
		const Rcpp::NumericVector &	id )

find_position()

int find_position	(	const std::string	what,
		Rcpp::CharacterVector &	table )

Find the position of a string in a character vector.

Parameters

what	the string to look for
table	where to look for the string

Returns

the position of the string with 0-based indexing if the string is found; -1 otherwise

from_to()

void from_to	(	const Rcpp::CharacterVector &	a,
		const Rcpp::CharacterVector &	b,
		std::vector< int > &	ai,
		std::vector< int > &	bi )

get_tokens()

Rcpp::List get_tokens

(

const Rcpp::CharacterVector &

code

)

MAKEMATRIX()

arma::mat MAKEMATRIX

(

const Rcpp::S4 &

matlist

)

mat2df()

Rcpp::List mat2df

(

Rcpp::NumericMatrix const &

x

)

MVGAUSS() [1/2]

arma::mat MVGAUSS	(	arma::mat &	OMEGA_,
		int	n )

MVGAUSS() [2/2]

arma::mat MVGAUSS	(	Rcpp::NumericMatrix &	OMEGA_,
		int	n )

Simulate from a multivariate normal distribution with mean 0.

Parameters

OMEGA_	the covariance matrix
n	the number of variates to simulate

Returns

matrix of simulated variates

negative_istate()

void negative_istate	(	int	istate,
		int	maxsteps,
		double	rtol,
		double	atol,
		int	itol )

set_omega()

void set_omega	(	SEXP	loc,
		Rcpp::NumericMatrix &	omega_ )

sort_unique()

template<class T>

void sort_unique

(

T &

a

)

SUPERMATRIX()

Rcpp::NumericMatrix SUPERMATRIX

(

const Rcpp::List &

a

)

tofun()

DL_FUNC tofun

(

SEXP

a

)